JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0268.1 ADR1 Saccharomyces cerevisiae C2H2 Other
MA0268.2 ADR1 Saccharomyces cerevisiae C2H2 Other
MA0269.1 AFT1 Saccharomyces cerevisiae
MA0269.2 AFT1 Saccharomyces cerevisiae
MA0270.1 AFT2 Saccharomyces cerevisiae
MA0270.2 AFT2 Saccharomyces cerevisiae
MA0271.1 ARG80 Saccharomyces cerevisiae MADS
MA0272.1 ARG81 Saccharomyces cerevisiae C6
MA0272.2 ARG81 Saccharomyces cerevisiae C6
MA0273.1 ARO80 Saccharomyces cerevisiae C6
MA0273.2 ARO80 Saccharomyces cerevisiae C6
MA0274.1 ARR1 Saccharomyces cerevisiae Basic
MA0275.1 ASG1 Saccharomyces cerevisiae C6
MA0276.1 ASH1 Saccharomyces cerevisiae Other C4-GATA-related
MA0277.1 AZF1 Saccharomyces cerevisiae C2H2
MA0278.1 BAS1 Saccharomyces cerevisiae Tryptophan Myb/SANT
MA0278.2 BAS1 Saccharomyces cerevisiae Tryptophan Myb/SANT
MA0279.1 CAD1 Saccharomyces cerevisiae Basic
MA0279.2 CAD1 Saccharomyces cerevisiae Basic
MA0279.3 CAD1 Saccharomyces cerevisiae Basic
MA0280.1 CAT8 Saccharomyces cerevisiae C6
MA0280.2 CAT8 Saccharomyces cerevisiae C6
MA0281.1 CBF1 Saccharomyces cerevisiae Basic bHLH-ZIP
MA0281.2 CBF1 Saccharomyces cerevisiae Basic bHLH-ZIP
MA0281.3 CBF1 Saccharomyces cerevisiae Basic bHLH-ZIP
MA0282.1 CEP3 Saccharomyces cerevisiae C6
MA0282.2 CEP3 Saccharomyces cerevisiae C6
MA0283.1 CHA4 Saccharomyces cerevisiae C6
MA0284.1 CIN5 Saccharomyces cerevisiae Basic
MA0284.2 CIN5 Saccharomyces cerevisiae Basic
MA0284.3 CIN5 Saccharomyces cerevisiae Basic
MA0285.1 CRZ1 Saccharomyces cerevisiae C2H2 Other
MA0285.2 CRZ1 Saccharomyces cerevisiae C2H2 Other
MA0286.1 CST6 Saccharomyces cerevisiae Basic
MA0286.2 CST6 Saccharomyces cerevisiae Basic
MA0287.1 CUP2 Saccharomyces cerevisiae Copper-fist
MA0288.1 CUP9 Saccharomyces cerevisiae Homeo TALE-type
MA0289.1 DAL80 Saccharomyces cerevisiae Other C4-GATA-related
MA0290.1 DAL81 Saccharomyces cerevisiae C6
MA0291.1 DAL82 Saccharomyces cerevisiae
MA0292.1 ECM22 Saccharomyces cerevisiae C6
MA0292.2 ECM22 Saccharomyces cerevisiae C6
MA0293.1 ECM23 Saccharomyces cerevisiae Other C4-GATA-related
MA0293.2 ECM23 Saccharomyces cerevisiae Other C4-GATA-related
MA0294.1 EDS1 Saccharomyces cerevisiae C6
MA0294.2 EDS1 Saccharomyces cerevisiae C6
MA0295.1 FHL1 Saccharomyces cerevisiae Fork FOX
MA0295.2 FHL1 Saccharomyces cerevisiae Fork FOX
MA0296.1 FKH1 Saccharomyces cerevisiae Fork FOX
MA0296.2 FKH1 Saccharomyces cerevisiae Fork FOX
Showing 50 profiles of page 12 from 86 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.