JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1458.1 Hsf Drosophila melanogaster Heat HSF
MA1458.2 Hsf Drosophila melanogaster Heat HSF
MA1459.1 M1BP Drosophila melanogaster C2H2 More
MA1459.2 M1BP Drosophila melanogaster C2H2 More
MA1460.1 pho Drosophila melanogaster C2H2 More
MA1460.2 pho Drosophila melanogaster C2H2 More
MA1461.1 sv Drosophila melanogaster Paired Paired
MA1461.2 sv Drosophila melanogaster Paired Paired
MA1462.1 vfl Drosophila melanogaster C2H2 More
MA1462.2 vfl Drosophila melanogaster C2H2 More
MA1463.1 ARGFX Homo sapiens Homeo Paired-related
MA1463.2 ARGFX Homo sapiens Homeo Paired-related
MA1464.1 ARNT2 Homo sapiens Basic PAS
MA1464.2 ARNT2 Homo sapiens Basic PAS
MA1466.1 ATF6 Homo sapiens Basic Jun-related
MA1466.2 ATF6 Homo sapiens Basic Jun-related
MA1467.1 ATOH1 Homo sapiens Basic Tal-related
MA1467.2 Atoh1 Mus musculus Basic Tal-related
MA1467.3 Atoh1 Mus musculus Basic Tal-related
MA1468.1 ATOH7 Homo sapiens Basic Tal-related
MA1470.1 BACH2 Homo sapiens Basic Jun-related
MA1470.2 BACH2 Homo sapiens Basic Jun-related
MA1471.1 BARX2 Homo sapiens Homeo NK
MA1471.2 BARX2 Homo sapiens Homeo NK
MA1472.1 BHLHA15 Homo sapiens Basic Tal-related
Showing 25 profiles of page 113 from 172 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.