JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA0062.3/

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "matrix_id": "MA0062.3",
    "name": "GABPA",
    "base_id": "MA0062",
    "version": 3,
    "collection": "CORE",
    "sequence_logo": "https://testjaspar.uio.no/static/logos/svg/MA0062.3.svg",
    "versions_url": "https://testjaspar.uio.no/api/v1/matrix/MA0062/versions",
    "sites_url": null,
    "pfm": {
        "A": [
            15887.0,
            10981.0,
            7639.0,
            52260.0,
            929.0,
            3885.0,
            862.0,
            1398.0,
            993.0,
            1722.0,
            2219.0,
            5344.0,
            11903.0,
            13522.0
        ],
        "C": [
            16922.0,
            21679.0,
            41398.0,
            3988.0,
            55664.0,
            1443.0,
            1230.0,
            61373.0,
            63107.0,
            1542.0,
            6328.0,
            12006.0,
            18154.0,
            17382.0
        ],
        "G": [
            15945.0,
            13751.0,
            6989.0,
            4873.0,
            2169.0,
            965.0,
            1633.0,
            1150.0,
            520.0,
            4561.0,
            51920.0,
            7720.0,
            15081.0,
            13187.0
        ],
        "T": [
            16725.0,
            19068.0,
            9453.0,
            4358.0,
            6717.0,
            59186.0,
            61754.0,
            1558.0,
            859.0,
            57654.0,
            5012.0,
            40409.0,
            20341.0,
            21388.0
        ]
    },
    "class": [
        "Tryptophan cluster factors"
    ],
    "family": [
        "Ets-related"
    ],
    "tfe_id": [],
    "medline": [
        "9461436"
    ],
    "pazar_tf_id": [],
    "remap_tf_name": "GABPA",
    "source": "ReMap",
    "tax_group": "vertebrates",
    "type": "ChIP-seq",
    "tfe_ids": [],
    "pubmed_ids": [
        "9461436"
    ],
    "pazar_tf_ids": [],
    "uniprot_ids": [
        "Q06546"
    ],
    "species": [
        {
            "tax_id": 9606,
            "name": "Homo sapiens"
        }
    ],
    "tffm": {
        "tffm_id": "TFFM0039.2",
        "base_id": "TFFM0039",
        "version": 2,
        "log_p_1st_order": 13451.9,
        "log_p_detailed": 7520.96,
        "experiment_name": "ReMap2020_GABPA",
        "tffm_url": "https://testjaspar.uio.no/api/v1/tffm/TFFM0039.2/"
    }
}

Matrix Details